BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014G03LP1|AL426728
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1544 0.0
>3x_Contig1805
Length = 19369
Score = 1544 bits (778), Expect = 0.0
Identities = 791/795 (99%), Gaps = 1/795 (0%)
Strand = Plus / Minus
Query: 1 gatccacaatgattttgattcccaaaccgtgtgcnctgtcgatcaaattgaagatatctt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 15053 gatccacaatgattttgattcccaaaccgtgtgctctgtcgatcaaattgaagatatctt 14994
Query: 61 cattcgtaccgtagcgtggccaaaccttttcgtaatctgaaatatcataacccatatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14993 cattcgtaccgtagcgtggccaaaccttttcgtaatctgaaatatcataacccatatcct 14934
Query: 121 cttgtggagaatcatagaatgggcagatccaaatcgcgttas-tccaagttctttaatgt 179
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 14933 cttgtggagaatcatagaatgggcagatccaaatcgcgttagctccaagttctttaatgt 14874
Query: 180 actccagcttcgaatcaatacctttgatatcaccccatccatcatggttagagtctttga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14873 actccagcttcgaatcaatacctttgatatcaccccatccatcatggttagagtctttga 14814
Query: 240 aactagcagggtaaacctggtaaacaattgcttctttccaccactttgggtctgtttggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14813 aactagcagggtaaacctggtaaacaattgcttctttccaccactttgggtctgtttggg 14754
Query: 300 ggtgctcggatacaaacttggtaatcgtcatacttgatgtttttttgcgcttaacgtttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14753 ggtgctcggatacaaacttggtaatcgtcatacttgatgtttttttgcgcttaacgtttc 14694
Query: 360 gatctgtttgagtctattctctcttattttttcttgcagcgatcgtcctgtcataccttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14693 gatctgtttgagtctattctctcttattttttcttgcagcgatcgtcctgtcataccttt 14634
Query: 420 ggaataacgcttttttataatctttctggtcctggtttgtaacacttaacaattgagcaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14633 ggaataacgcttttttataatctttctggtcctggtttgtaacacttaacaattgagcaa 14574
Query: 480 gttttatccagctgaacagacatgacagtaatatgactatctgtttgatgttatgctaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14573 gttttatccagctgaacagacatgacagtaatatgactatctgtttgatgttatgctaga 14514
Query: 540 caagatacaccttgaaagagaccgggtggagtcatgagtatttggggtggaactagaaac 599
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 14513 caagatacaccttgaaagagaccgggtggagtcatgagtttttggggtggaactagaaac 14454
Query: 600 agcgttttccccacacctttcttcaacgtgctgtactgttctagatggcgtctggcatga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14453 agcgttttccccacacctttcttcaacgtgctgtactgttctagatggcgtctggcatga 14394
Query: 660 ccatctatcgaagttattaccattctgttgaatgcagccaattttttttgaaaaacaaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14393 ccatctatcgaagttattaccattctgttgaatgcagccaattttttttgaaaaacaaaa 14334
Query: 720 gttagtagtttcaactaaaagtaatagaaactttgctcgagggaaacggaaaaatggaga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14333 gttagtagtttcaactaaaagtaatagaaactttgctcgagggaaacggaaaaatggaga 14274
Query: 780 aattttctcgaggga 794
|||||||||||||||
Sbjct: 14273 aattttctcgaggga 14259
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6274
Number of Sequences: 1807
Number of extensions: 6274
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)